Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KCMF1Q9P0J7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 AC018553.1-201ENST00000616682 1458 ntBASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 TMEM179-206ENST00000616017 1645 ntBASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 ESRRAP1-201ENST00000400596 1257 ntBASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 POM121L13P-201ENST00000422362 380 ntBASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 AP001271.2-201ENST00000624018 1556 ntBASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCMF1Q9P0J7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.7■□□□□ 0.58
KCMF1Q9P0J7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 TFP1-202ENST00000475455 1573 ntBASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 KRT18P29-201ENST00000397031 1267 ntBASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.69■□□□□ 0.58
KCMF1Q9P0J7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 AL121829.2-201ENST00000620908 328 ntBASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.68■□□□□ 0.58
KCMF1Q9P0J7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms