Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKIPSDQ9NZQ3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCKIPSDQ9NZQ3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.96■□□□□ 0.79
NCKIPSDQ9NZQ3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.96■□□□□ 0.79
NCKIPSDQ9NZQ3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 AC087633.2-202ENST00000565166 1439 ntBASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 POM121L13P-201ENST00000422362 380 ntBASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 AL596275.1-201ENST00000423464 877 ntBASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCKIPSDQ9NZQ3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 AC069544.1-201ENST00000609399 999 ntBASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NCKIPSDQ9NZQ3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NCKIPSDQ9NZQ3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NCKIPSDQ9NZQ3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NCKIPSDQ9NZQ3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms