Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 KRT19P1-201ENST00000405746 1186 ntBASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMARCAL1Q9NZC9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 MIR5787-201ENST00000611784 55 ntBASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
SMARCAL1Q9NZC9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SMARCAL1Q9NZC9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SMARCAL1Q9NZC9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 AC016405.3-201ENST00000607710 860 ntBASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCAL1Q9NZC9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 KRT18P5-201ENST00000436075 1291 ntBASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 KRT8P17-201ENST00000453110 1448 ntBASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCAL1Q9NZC9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCAL1Q9NZC9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms