Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 POM121L13P-201ENST00000422362 380 ntBASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 AP003097.1-201ENST00000530657 1135 ntBASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
BLOC1S4Q9NUP1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 AC026366.1-201ENST00000488803 879 ntBASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
BLOC1S4Q9NUP1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 AC233263.1-201ENST00000578059 224 ntBASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 MIR4651-201ENST00000582622 73 ntBASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 AL121829.2-201ENST00000620908 328 ntBASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 AL121906.2-201ENST00000621597 723 ntBASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.98■■□□□ 1.11
BLOC1S4Q9NUP1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
BLOC1S4Q9NUP1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms