Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 BX119927.1-201ENST00000636596 1552 ntBASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 UBE2DNL-204ENST00000602536 740 ntBASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB16Q9NRJ7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 AC026271.2-201ENST00000428091 497 ntBASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB16Q9NRJ7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 AC087623.3-201ENST00000607047 1098 ntBASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB16Q9NRJ7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHB16Q9NRJ7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms