Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TLR9Q9NR96 AC131212.4-201ENST00000623606 975 ntBASIC21.01■□□□□ 0.95
TLR9Q9NR96 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 AL137060.1-201ENST00000618151 2648 ntBASIC21.01■□□□□ 0.95
TLR9Q9NR96 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TLR9Q9NR96 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21■□□□□ 0.95
TLR9Q9NR96 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
TLR9Q9NR96 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TLR9Q9NR96 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21■□□□□ 0.95
TLR9Q9NR96 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TLR9Q9NR96 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21■□□□□ 0.95
TLR9Q9NR96 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TLR9Q9NR96 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21■□□□□ 0.95
TLR9Q9NR96 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TLR9Q9NR96 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TLR9Q9NR96 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21■□□□□ 0.95
TLR9Q9NR96 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TLR9Q9NR96 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21■□□□□ 0.95
TLR9Q9NR96 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21■□□□□ 0.95
TLR9Q9NR96 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TLR9Q9NR96 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TLR9Q9NR96 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 TFP1-202ENST00000475455 1573 ntBASIC20.99■□□□□ 0.95
TLR9Q9NR96 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.99■□□□□ 0.95
TLR9Q9NR96 TUBB8P6-201ENST00000436895 1288 ntBASIC20.99■□□□□ 0.95
TLR9Q9NR96 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 KRT18P16-201ENST00000510337 1294 ntBASIC20.99■□□□□ 0.95
TLR9Q9NR96 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.99■□□□□ 0.95
TLR9Q9NR96 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.99■□□□□ 0.95
TLR9Q9NR96 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TLR9Q9NR96 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TLR9Q9NR96 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.98■□□□□ 0.95
TLR9Q9NR96 AC005229.4-201ENST00000610085 2198 ntBASIC20.97■□□□□ 0.95
TLR9Q9NR96 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TLR9Q9NR96 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TLR9Q9NR96 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.97■□□□□ 0.95
TLR9Q9NR96 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TLR9Q9NR96 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.97■□□□□ 0.95
TLR9Q9NR96 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.97■□□□□ 0.95
TLR9Q9NR96 AK4P3-201ENST00000418260 669 ntBASIC20.97■□□□□ 0.95
TLR9Q9NR96 BX664615.1-201ENST00000443558 458 ntBASIC20.97■□□□□ 0.95
TLR9Q9NR96 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.97■□□□□ 0.95
TLR9Q9NR96 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.97■□□□□ 0.95
TLR9Q9NR96 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TLR9Q9NR96 FAM87A-204ENST00000613235 858 ntBASIC20.97■□□□□ 0.95
TLR9Q9NR96 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.97■□□□□ 0.95
TLR9Q9NR96 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TLR9Q9NR96 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TLR9Q9NR96 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TLR9Q9NR96 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.97■□□□□ 0.95
TLR9Q9NR96 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.97■□□□□ 0.95
TLR9Q9NR96 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TLR9Q9NR96 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TLR9Q9NR96 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 KRT16P6-202ENST00000425692 1426 ntBASIC20.96■□□□□ 0.95
TLR9Q9NR96 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TLR9Q9NR96 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TLR9Q9NR96 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.96■□□□□ 0.95
TLR9Q9NR96 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms