Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 RNF165-205ENST00000588679 2904 ntBASIC18.55■□□□□ 0.56
KLHL1Q9NR64 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 AL390719.1-204ENST00000412397 1219 ntBASIC18.55■□□□□ 0.56
KLHL1Q9NR64 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
KLHL1Q9NR64 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 AC008550.1-201ENST00000511500 884 ntBASIC18.54■□□□□ 0.56
KLHL1Q9NR64 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.54■□□□□ 0.56
KLHL1Q9NR64 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 AC007952.6-201ENST00000573168 2673 ntBASIC18.53■□□□□ 0.56
KLHL1Q9NR64 AC003957.1-201ENST00000625108 2673 ntBASIC18.53■□□□□ 0.56
KLHL1Q9NR64 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 AL596275.1-201ENST00000423464 877 ntBASIC18.53■□□□□ 0.56
KLHL1Q9NR64 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 AC005829.2-201ENST00000571422 1056 ntBASIC18.53■□□□□ 0.56
KLHL1Q9NR64 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
KLHL1Q9NR64 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
KLHL1Q9NR64 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms