Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 AL121829.2-201ENST00000620908 328 ntBASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 AL121906.2-201ENST00000621597 723 ntBASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRDM9Q9NQV7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 AL391422.3-201ENST00000603791 2761 ntBASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 AC124283.5-201ENST00000624661 1809 ntBASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 RN7SL471P-201ENST00000580476 299 ntBASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 MTDHP1-201ENST00000605323 784 ntBASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRDM9Q9NQV7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.65■□□□□ 0.58
PRDM9Q9NQV7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRDM9Q9NQV7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRDM9Q9NQV7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PRDM9Q9NQV7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PRDM9Q9NQV7 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 PRKY-204ENST00000533551 1019 ntBASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRDM9Q9NQV7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms