Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS4Q9NQG7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 AP000525.1-201ENST00000608286 694 ntBASIC20.44■□□□□ 0.86
HPS4Q9NQG7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.44■□□□□ 0.86
HPS4Q9NQG7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 NIFKP9-201ENST00000419265 221 ntBASIC20.43■□□□□ 0.86
HPS4Q9NQG7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 MIR6786-201ENST00000616843 113 ntBASIC20.43■□□□□ 0.86
HPS4Q9NQG7 CR392000.1-201ENST00000624770 1228 ntBASIC20.43■□□□□ 0.86
HPS4Q9NQG7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.43■□□□□ 0.86
HPS4Q9NQG7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 FP700111.2-201ENST00000619190 1892 ntBASIC20.42■□□□□ 0.86
HPS4Q9NQG7 UNC93B2-201ENST00000285383 730 ntBASIC20.42■□□□□ 0.86
HPS4Q9NQG7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 RN7SL850P-201ENST00000579959 291 ntBASIC20.42■□□□□ 0.86
HPS4Q9NQG7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.42■□□□□ 0.86
HPS4Q9NQG7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 AC073130.3-201ENST00000624389 2278 ntBASIC20.41■□□□□ 0.86
HPS4Q9NQG7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 KSR1P1-201ENST00000446298 240 ntBASIC20.41■□□□□ 0.86
HPS4Q9NQG7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 AC116562.2-201ENST00000507042 360 ntBASIC20.41■□□□□ 0.86
HPS4Q9NQG7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 AC145285.6-201ENST00000604632 637 ntBASIC20.41■□□□□ 0.86
HPS4Q9NQG7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPS4Q9NQG7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 MIR1238-201ENST00000408483 83 ntBASIC20.4■□□□□ 0.86
HPS4Q9NQG7 TMPOP1-202ENST00000424642 1267 ntBASIC20.4■□□□□ 0.86
HPS4Q9NQG7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.4■□□□□ 0.86
HPS4Q9NQG7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms