Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NLRC4Q9NPP4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NLRC4Q9NPP4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
NLRC4Q9NPP4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 CDCA4P2-201ENST00000441182 718 ntBASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 AC133552.2-202ENST00000575694 574 ntBASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 AP001271.2-201ENST00000624018 1556 ntBASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
NLRC4Q9NPP4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 PHGDH-210ENST00000641115 1638 ntBASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 AC023632.3-201ENST00000521633 145 ntBASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 RNF165-205ENST00000588679 2904 ntBASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.38■■□□□ 1.01
NLRC4Q9NPP4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 AC098818.2-201ENST00000564925 2320 ntBASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 AC105036.2-201ENST00000569468 176 ntBASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NLRC4Q9NPP4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 AIRN-201ENST00000601203 4374 ntBASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 MKRN4P-201ENST00000444706 1521 ntBASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLRC4Q9NPP4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
NLRC4Q9NPP4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NLRC4Q9NPP4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NLRC4Q9NPP4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NLRC4Q9NPP4 MIR663A-201ENST00000385250 93 ntBASIC21.35■■□□□ 1.01
NLRC4Q9NPP4 AF201337.1-201ENST00000520239 748 ntBASIC21.35■■□□□ 1.01
NLRC4Q9NPP4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.35■■□□□ 1.01
NLRC4Q9NPP4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.35■■□□□ 1.01
NLRC4Q9NPP4 AL137784.2-201ENST00000607332 1000 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms