Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 AC004408.2-201ENST00000623613 2777 ntBASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLK4Q9HAZ1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.18■□□□□ 0.66
CLK4Q9HAZ1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLK4Q9HAZ1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 AC026471.1-201ENST00000564629 3026 ntBASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
CLK4Q9HAZ1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.15■□□□□ 0.66
CLK4Q9HAZ1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms