Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.83■□□□□ 0.6
PIF1Q9H611 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.83■□□□□ 0.6
PIF1Q9H611 AC087623.3-201ENST00000607047 1098 ntBASIC18.83■□□□□ 0.6
PIF1Q9H611 AL356652.1-201ENST00000615962 565 ntBASIC18.83■□□□□ 0.6
PIF1Q9H611 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.83■□□□□ 0.6
PIF1Q9H611 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PIF1Q9H611 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PIF1Q9H611 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PIF1Q9H611 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.83■□□□□ 0.6
PIF1Q9H611 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PIF1Q9H611 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PIF1Q9H611 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PIF1Q9H611 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PIF1Q9H611 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.82■□□□□ 0.6
PIF1Q9H611 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.82■□□□□ 0.6
PIF1Q9H611 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PIF1Q9H611 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.82■□□□□ 0.6
PIF1Q9H611 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.82■□□□□ 0.6
PIF1Q9H611 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.82■□□□□ 0.6
PIF1Q9H611 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.82■□□□□ 0.6
PIF1Q9H611 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.82■□□□□ 0.6
PIF1Q9H611 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.82■□□□□ 0.6
PIF1Q9H611 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PIF1Q9H611 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PIF1Q9H611 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 KRT19P1-201ENST00000405746 1186 ntBASIC18.81■□□□□ 0.6
PIF1Q9H611 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PIF1Q9H611 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.81■□□□□ 0.6
PIF1Q9H611 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 Z82202.1-201ENST00000623446 1880 ntBASIC18.81■□□□□ 0.6
PIF1Q9H611 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PIF1Q9H611 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIF1Q9H611 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.8■□□□□ 0.6
PIF1Q9H611 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.8■□□□□ 0.6
PIF1Q9H611 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.8■□□□□ 0.6
PIF1Q9H611 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 AC093503.3-201ENST00000624917 2352 ntBASIC18.8■□□□□ 0.6
PIF1Q9H611 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.8■□□□□ 0.6
PIF1Q9H611 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 SLC7A5P1-201ENST00000568957 537 ntBASIC18.8■□□□□ 0.6
PIF1Q9H611 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.8■□□□□ 0.6
PIF1Q9H611 UBE2DNL-204ENST00000602536 740 ntBASIC18.8■□□□□ 0.6
PIF1Q9H611 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PIF1Q9H611 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.8■□□□□ 0.6
PIF1Q9H611 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PIF1Q9H611 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.8■□□□□ 0.6
PIF1Q9H611 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.8■□□□□ 0.6
PIF1Q9H611 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PIF1Q9H611 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PIF1Q9H611 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PIF1Q9H611 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.79■□□□□ 0.6
PIF1Q9H611 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.79■□□□□ 0.6
PIF1Q9H611 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PIF1Q9H611 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.79■□□□□ 0.6
PIF1Q9H611 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PIF1Q9H611 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.79■□□□□ 0.6
PIF1Q9H611 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms