Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MED28Q9H204 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.83■□□□□ 0.28
MED28Q9H204 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MED28Q9H204 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MED28Q9H204 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.83■□□□□ 0.28
MED28Q9H204 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MED28Q9H204 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
MED28Q9H204 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MED28Q9H204 AC012313.1-201ENST00000593393 3059 ntBASIC16.83■□□□□ 0.28
MED28Q9H204 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MED28Q9H204 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MED28Q9H204 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MED28Q9H204 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
MED28Q9H204 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
MED28Q9H204 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MED28Q9H204 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MED28Q9H204 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MED28Q9H204 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.82■□□□□ 0.28
MED28Q9H204 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MED28Q9H204 OR2I1P-207ENST00000453522 948 ntBASIC16.82■□□□□ 0.28
MED28Q9H204 AC137630.3-201ENST00000607245 391 ntBASIC16.82■□□□□ 0.28
MED28Q9H204 MIR7108-201ENST00000614319 87 ntBASIC16.82■□□□□ 0.28
MED28Q9H204 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.82■□□□□ 0.28
MED28Q9H204 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
MED28Q9H204 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MED28Q9H204 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
MED28Q9H204 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MED28Q9H204 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MED28Q9H204 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.81■□□□□ 0.28
MED28Q9H204 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MED28Q9H204 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MED28Q9H204 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MED28Q9H204 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
MED28Q9H204 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MED28Q9H204 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MED28Q9H204 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.81■□□□□ 0.28
MED28Q9H204 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.81■□□□□ 0.28
MED28Q9H204 DUX4L18-201ENST00000553347 1267 ntBASIC16.81■□□□□ 0.28
MED28Q9H204 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.81■□□□□ 0.28
MED28Q9H204 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MED28Q9H204 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MED28Q9H204 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MED28Q9H204 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MED28Q9H204 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
MED28Q9H204 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.81■□□□□ 0.28
MED28Q9H204 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.8■□□□□ 0.28
MED28Q9H204 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.8■□□□□ 0.28
MED28Q9H204 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MED28Q9H204 AC106820.2-201ENST00000563775 3264 ntBASIC16.8■□□□□ 0.28
MED28Q9H204 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.8■□□□□ 0.28
MED28Q9H204 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MED28Q9H204 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.8■□□□□ 0.28
MED28Q9H204 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.8■□□□□ 0.28
MED28Q9H204 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.8■□□□□ 0.28
MED28Q9H204 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.8■□□□□ 0.28
MED28Q9H204 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.8■□□□□ 0.28
MED28Q9H204 PVT1_1.1-201ENST00000615125 194 ntBASIC16.8■□□□□ 0.28
MED28Q9H204 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.8■□□□□ 0.28
MED28Q9H204 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MED28Q9H204 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.8■□□□□ 0.28
MED28Q9H204 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.8■□□□□ 0.28
MED28Q9H204 AL354751.1-201ENST00000412768 1863 ntBASIC16.8■□□□□ 0.28
MED28Q9H204 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MED28Q9H204 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MED28Q9H204 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MED28Q9H204 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.79■□□□□ 0.28
MED28Q9H204 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MED28Q9H204 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MED28Q9H204 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MED28Q9H204 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms