Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 AP001271.2-201ENST00000624018 1556 ntBASIC20.56■□□□□ 0.88
DDX47Q9H0S4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
DDX47Q9H0S4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 LINC01465-201ENST00000408887 1940 ntBASIC20.55■□□□□ 0.88
DDX47Q9H0S4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 AC010536.3-201ENST00000620306 533 ntBASIC20.55■□□□□ 0.88
DDX47Q9H0S4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX47Q9H0S4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX47Q9H0S4 KRT8P20-201ENST00000423953 1409 ntBASIC20.53■□□□□ 0.88
DDX47Q9H0S4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX47Q9H0S4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms