Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 Z98044.1-201ENST00000632503 1764 ntBASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 ABHD17AP5-201ENST00000580133 923 ntBASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 MIR4787-201ENST00000607364 84 ntBASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLIRPQ9GZT3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 MIR6724-1-201ENST00000616420 92 ntBASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 MIR6724-2-201ENST00000616483 92 ntBASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 MIR6724-4-201ENST00000617390 92 ntBASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 MIR6724-3-201ENST00000622482 92 ntBASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.38■□□□□ 0.37
SLIRPQ9GZT3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 MKRN4P-201ENST00000444706 1521 ntBASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 AC099398.1-201ENST00000567919 2776 ntBASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLIRPQ9GZT3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 TSPY9P-201ENST00000440215 945 ntBASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 TSPY11P-201ENST00000442607 1045 ntBASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLIRPQ9GZT3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.35■□□□□ 0.37
SLIRPQ9GZT3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms