Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 PRORSD1P-201ENST00000295112 541 ntBASIC17.38■□□□□ 0.37
VRK1Q99986 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VRK1Q99986 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.38■□□□□ 0.37
VRK1Q99986 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.38■□□□□ 0.37
VRK1Q99986 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.38■□□□□ 0.37
VRK1Q99986 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.38■□□□□ 0.37
VRK1Q99986 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VRK1Q99986 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.38■□□□□ 0.37
VRK1Q99986 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.38■□□□□ 0.37
VRK1Q99986 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
VRK1Q99986 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
VRK1Q99986 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.38■□□□□ 0.37
VRK1Q99986 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.38■□□□□ 0.37
VRK1Q99986 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.38■□□□□ 0.37
VRK1Q99986 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
VRK1Q99986 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VRK1Q99986 AC087633.2-202ENST00000565166 1439 ntBASIC17.38■□□□□ 0.37
VRK1Q99986 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
VRK1Q99986 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.37■□□□□ 0.37
VRK1Q99986 AC128676.1-201ENST00000454392 318 ntBASIC17.37■□□□□ 0.37
VRK1Q99986 PNMA6B-201ENST00000538162 1200 ntBASIC17.37■□□□□ 0.37
VRK1Q99986 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.37■□□□□ 0.37
VRK1Q99986 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.37■□□□□ 0.37
VRK1Q99986 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VRK1Q99986 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
VRK1Q99986 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VRK1Q99986 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VRK1Q99986 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VRK1Q99986 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VRK1Q99986 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.36■□□□□ 0.37
VRK1Q99986 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.36■□□□□ 0.37
VRK1Q99986 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VRK1Q99986 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 AL158047.1-201ENST00000445918 881 ntBASIC17.36■□□□□ 0.37
VRK1Q99986 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
VRK1Q99986 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.36■□□□□ 0.37
VRK1Q99986 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK1Q99986 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
VRK1Q99986 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.35■□□□□ 0.37
VRK1Q99986 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK1Q99986 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VRK1Q99986 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.35■□□□□ 0.37
VRK1Q99986 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VRK1Q99986 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.35■□□□□ 0.37
VRK1Q99986 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
VRK1Q99986 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.35■□□□□ 0.37
VRK1Q99986 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.35■□□□□ 0.37
VRK1Q99986 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.35■□□□□ 0.37
VRK1Q99986 AC142381.4-202ENST00000563973 229 ntBASIC17.35■□□□□ 0.37
VRK1Q99986 C2orf69P4-201ENST00000565394 541 ntBASIC17.35■□□□□ 0.37
VRK1Q99986 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.35■□□□□ 0.37
VRK1Q99986 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK1Q99986 AL356652.1-201ENST00000615962 565 ntBASIC17.35■□□□□ 0.37
VRK1Q99986 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VRK1Q99986 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.35■□□□□ 0.37
VRK1Q99986 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VRK1Q99986 BX323043.1-201ENST00000641006 1765 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms