Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXC2Q99958 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXC2Q99958 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXC2Q99958 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
FOXC2Q99958 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXC2Q99958 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FOXC2Q99958 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXC2Q99958 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
FOXC2Q99958 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXC2Q99958 AC004980.1-204ENST00000429707 299 ntBASIC16.66■□□□□ 0.26
FOXC2Q99958 SLC25A1P2-201ENST00000430693 912 ntBASIC16.66■□□□□ 0.26
FOXC2Q99958 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
FOXC2Q99958 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXC2Q99958 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
FOXC2Q99958 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXC2Q99958 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 AP000692.2-201ENST00000608391 879 ntBASIC16.66■□□□□ 0.26
FOXC2Q99958 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXC2Q99958 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXC2Q99958 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXC2Q99958 AC011484.1-201ENST00000377652 1995 ntBASIC16.66■□□□□ 0.26
FOXC2Q99958 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXC2Q99958 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
FOXC2Q99958 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
FOXC2Q99958 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
FOXC2Q99958 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
FOXC2Q99958 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
FOXC2Q99958 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 AL512604.3-201ENST00000569583 964 ntBASIC16.65■□□□□ 0.26
FOXC2Q99958 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXC2Q99958 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.65■□□□□ 0.26
FOXC2Q99958 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
FOXC2Q99958 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 EP400NL-214ENST00000641289 2402 ntBASIC16.65■□□□□ 0.26
FOXC2Q99958 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXC2Q99958 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
FOXC2Q99958 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
FOXC2Q99958 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FOXC2Q99958 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.64■□□□□ 0.25
FOXC2Q99958 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
FOXC2Q99958 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.64■□□□□ 0.25
FOXC2Q99958 AC130371.2-201ENST00000619443 611 ntBASIC16.64■□□□□ 0.25
FOXC2Q99958 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.64■□□□□ 0.25
FOXC2Q99958 AC141257.4-201ENST00000634557 245 ntBASIC16.64■□□□□ 0.25
FOXC2Q99958 AC136944.6-201ENST00000634818 245 ntBASIC16.64■□□□□ 0.25
FOXC2Q99958 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.64■□□□□ 0.25
FOXC2Q99958 AC233723.2-201ENST00000623798 2106 ntBASIC16.64■□□□□ 0.25
FOXC2Q99958 AP006587.1-201ENST00000534129 1502 ntBASIC16.64■□□□□ 0.25
FOXC2Q99958 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
FOXC2Q99958 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FOXC2Q99958 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXC2Q99958 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXC2Q99958 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
FOXC2Q99958 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
FOXC2Q99958 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
FOXC2Q99958 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXC2Q99958 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.63■□□□□ 0.25
FOXC2Q99958 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
FOXC2Q99958 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.63■□□□□ 0.25
FOXC2Q99958 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.63■□□□□ 0.25
FOXC2Q99958 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FOXC2Q99958 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.63■□□□□ 0.25
FOXC2Q99958 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXC2Q99958 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.63■□□□□ 0.25
FOXC2Q99958 AC069148.1-201ENST00000608741 768 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms