Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NOTCH4Q99466 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NOTCH4Q99466 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.46■□□□□ 0.87
NOTCH4Q99466 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NOTCH4Q99466 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 HLA-A-209ENST00000638375 975 ntBASIC20.46■□□□□ 0.87
NOTCH4Q99466 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 SMG8-203ENST00000578922 2178 ntBASIC20.46■□□□□ 0.87
NOTCH4Q99466 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NOTCH4Q99466 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NOTCH4Q99466 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NOTCH4Q99466 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
NOTCH4Q99466 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.45■□□□□ 0.86
NOTCH4Q99466 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NOTCH4Q99466 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NOTCH4Q99466 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.45■□□□□ 0.86
NOTCH4Q99466 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.45■□□□□ 0.86
NOTCH4Q99466 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.45■□□□□ 0.86
NOTCH4Q99466 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.45■□□□□ 0.86
NOTCH4Q99466 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.45■□□□□ 0.86
NOTCH4Q99466 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NOTCH4Q99466 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NOTCH4Q99466 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NOTCH4Q99466 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NOTCH4Q99466 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 KRT16P6-202ENST00000425692 1426 ntBASIC20.44■□□□□ 0.86
NOTCH4Q99466 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 AC022616.7-201ENST00000525383 220 ntBASIC20.44■□□□□ 0.86
NOTCH4Q99466 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.44■□□□□ 0.86
NOTCH4Q99466 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 AC096733.2-201ENST00000609937 1394 ntBASIC20.44■□□□□ 0.86
NOTCH4Q99466 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.44■□□□□ 0.86
NOTCH4Q99466 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NOTCH4Q99466 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NOTCH4Q99466 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NOTCH4Q99466 BX119927.1-201ENST00000636596 1552 ntBASIC20.43■□□□□ 0.86
NOTCH4Q99466 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
NOTCH4Q99466 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NOTCH4Q99466 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NOTCH4Q99466 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
NOTCH4Q99466 CRYGFP-201ENST00000418459 633 ntBASIC20.43■□□□□ 0.86
NOTCH4Q99466 AL137013.1-201ENST00000432946 1228 ntBASIC20.43■□□□□ 0.86
NOTCH4Q99466 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
NOTCH4Q99466 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NOTCH4Q99466 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NOTCH4Q99466 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
NOTCH4Q99466 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NOTCH4Q99466 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NOTCH4Q99466 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NOTCH4Q99466 Z85996.1-201ENST00000494644 937 ntBASIC20.43■□□□□ 0.86
NOTCH4Q99466 AC131212.4-201ENST00000623606 975 ntBASIC20.43■□□□□ 0.86
NOTCH4Q99466 MYC-208ENST00000641036 567 ntBASIC20.43■□□□□ 0.86
NOTCH4Q99466 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NOTCH4Q99466 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NOTCH4Q99466 TMEM179-206ENST00000616017 1645 ntBASIC20.42■□□□□ 0.86
NOTCH4Q99466 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NOTCH4Q99466 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.42■□□□□ 0.86
NOTCH4Q99466 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NOTCH4Q99466 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NOTCH4Q99466 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NOTCH4Q99466 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.42■□□□□ 0.86
NOTCH4Q99466 AK4P3-201ENST00000418260 669 ntBASIC20.42■□□□□ 0.86
NOTCH4Q99466 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NOTCH4Q99466 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.42■□□□□ 0.86
NOTCH4Q99466 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.42■□□□□ 0.86
NOTCH4Q99466 AC079834.2-201ENST00000609776 1949 ntBASIC20.42■□□□□ 0.86
NOTCH4Q99466 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NOTCH4Q99466 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.42■□□□□ 0.86
NOTCH4Q99466 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NOTCH4Q99466 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NOTCH4Q99466 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NOTCH4Q99466 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms