Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMD4Q96H15 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMD4Q96H15 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 CLDN5-201ENST00000403084 2357 ntBASIC16.6■□□□□ 0.25
TIMD4Q96H15 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 MIR4497-201ENST00000583208 89 ntBASIC16.6■□□□□ 0.25
TIMD4Q96H15 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 KRT17P2-201ENST00000300992 1314 ntBASIC16.6■□□□□ 0.25
TIMD4Q96H15 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMD4Q96H15 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TIMD4Q96H15 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 PHGDH-210ENST00000641115 1638 ntBASIC16.59■□□□□ 0.25
TIMD4Q96H15 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 AL596275.1-201ENST00000423464 877 ntBASIC16.59■□□□□ 0.25
TIMD4Q96H15 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 SMG8-203ENST00000578922 2178 ntBASIC16.59■□□□□ 0.25
TIMD4Q96H15 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 AC116351.2-201ENST00000606540 1585 ntBASIC16.59■□□□□ 0.25
TIMD4Q96H15 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
TIMD4Q96H15 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TIMD4Q96H15 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMD4Q96H15 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMD4Q96H15 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMD4Q96H15 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMD4Q96H15 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 SNORA78-201ENST00000459373 127 ntBASIC16.58■□□□□ 0.24
TIMD4Q96H15 AP002982.1-201ENST00000492365 877 ntBASIC16.58■□□□□ 0.24
TIMD4Q96H15 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 AL049637.2-201ENST00000641778 930 ntBASIC16.58■□□□□ 0.24
TIMD4Q96H15 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 HTR7P1-201ENST00000538670 1336 ntBASIC16.58■□□□□ 0.24
TIMD4Q96H15 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMD4Q96H15 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TIMD4Q96H15 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms