Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIPA1Q96FS4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIPA1Q96FS4 AC005363.2-201ENST00000618631 242 ntBASIC19.83■□□□□ 0.77
SIPA1Q96FS4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIPA1Q96FS4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 AL390955.1-201ENST00000428694 934 ntBASIC19.82■□□□□ 0.76
SIPA1Q96FS4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 FITM1-202ENST00000559294 800 ntBASIC19.82■□□□□ 0.76
SIPA1Q96FS4 NAPSB-206ENST00000562112 1266 ntBASIC19.82■□□□□ 0.76
SIPA1Q96FS4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 RN7SL850P-201ENST00000579959 291 ntBASIC19.82■□□□□ 0.76
SIPA1Q96FS4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 LINC01568-207ENST00000641790 1380 ntBASIC19.82■□□□□ 0.76
SIPA1Q96FS4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIPA1Q96FS4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.81■□□□□ 0.76
SIPA1Q96FS4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 AL445675.2-201ENST00000620291 557 ntBASIC19.81■□□□□ 0.76
SIPA1Q96FS4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIPA1Q96FS4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 PHGDH-210ENST00000641115 1638 ntBASIC19.8■□□□□ 0.76
SIPA1Q96FS4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.8■□□□□ 0.76
SIPA1Q96FS4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 KRT18P16-201ENST00000510337 1294 ntBASIC19.8■□□□□ 0.76
SIPA1Q96FS4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SIPA1Q96FS4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.79■□□□□ 0.76
SIPA1Q96FS4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.79■□□□□ 0.76
SIPA1Q96FS4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms