Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 KRT8P20-201ENST00000423953 1409 ntBASIC18.78■□□□□ 0.6
LRRC58Q96CX6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 KRT19P1-201ENST00000405746 1186 ntBASIC18.78■□□□□ 0.6
LRRC58Q96CX6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRRC58Q96CX6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 MYCNOS-205ENST00000641950 531 ntBASIC18.77■□□□□ 0.6
LRRC58Q96CX6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC58Q96CX6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
LRRC58Q96CX6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC58Q96CX6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC58Q96CX6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
LRRC58Q96CX6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 AL138781.2-201ENST00000617896 1843 ntBASIC18.76■□□□□ 0.59
LRRC58Q96CX6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC58Q96CX6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 TERF1P5-201ENST00000477545 1207 ntBASIC18.75■□□□□ 0.59
LRRC58Q96CX6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC58Q96CX6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC58Q96CX6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms