Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.15■■□□□ 1.14
ATP6V0A1Q93050 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
ATP6V0A1Q93050 AL512408.1-201ENST00000569378 2000 ntBASIC22.14■■□□□ 1.14
ATP6V0A1Q93050 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ATP6V0A1Q93050 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
ATP6V0A1Q93050 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.14■■□□□ 1.14
ATP6V0A1Q93050 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ATP6V0A1Q93050 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.14■■□□□ 1.14
ATP6V0A1Q93050 MIR1224-201ENST00000408193 85 ntBASIC22.14■■□□□ 1.13
ATP6V0A1Q93050 FAM197Y1-201ENST00000421178 764 ntBASIC22.14■■□□□ 1.13
ATP6V0A1Q93050 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A1Q93050 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A1Q93050 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A1Q93050 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
ATP6V0A1Q93050 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ATP6V0A1Q93050 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 AC018553.1-201ENST00000616682 1458 ntBASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ATP6V0A1Q93050 AL162377.1-201ENST00000618844 1793 ntBASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 AC073195.1-201ENST00000607241 877 ntBASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 TFP1-202ENST00000475455 1573 ntBASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP6V0A1Q93050 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 AP006587.1-201ENST00000534129 1502 ntBASIC22.11■■□□□ 1.13
ATP6V0A1Q93050 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 AC097493.4-201ENST00000641197 219 ntBASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ATP6V0A1Q93050 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.09■■□□□ 1.13
ATP6V0A1Q93050 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms