Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG3Q8WXD2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SCG3Q8WXD2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG3Q8WXD2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG3Q8WXD2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
SCG3Q8WXD2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SCG3Q8WXD2 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 AC008687.6-201ENST00000596318 630 ntBASIC20.18■□□□□ 0.82
SCG3Q8WXD2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SCG3Q8WXD2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 AC018445.3-201ENST00000624177 1945 ntBASIC20.17■□□□□ 0.82
SCG3Q8WXD2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 SMG8-203ENST00000578922 2178 ntBASIC20.17■□□□□ 0.82
SCG3Q8WXD2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 UNC93B5-201ENST00000530315 699 ntBASIC20.17■□□□□ 0.82
SCG3Q8WXD2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 AC006058.3-201ENST00000606217 1069 ntBASIC20.17■□□□□ 0.82
SCG3Q8WXD2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SCG3Q8WXD2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 AC099778.1-201ENST00000568593 1911 ntBASIC20.16■□□□□ 0.82
SCG3Q8WXD2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 AC026366.1-201ENST00000488803 879 ntBASIC20.16■□□□□ 0.82
SCG3Q8WXD2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SCG3Q8WXD2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 PRORSD1P-201ENST00000295112 541 ntBASIC20.15■□□□□ 0.82
SCG3Q8WXD2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 AC060766.5-201ENST00000590539 871 ntBASIC20.15■□□□□ 0.82
SCG3Q8WXD2 HLA-B-256ENST00000639848 1089 ntBASIC20.15■□□□□ 0.82
SCG3Q8WXD2 AP006294.2-201ENST00000641667 209 ntBASIC20.15■□□□□ 0.82
SCG3Q8WXD2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCG3Q8WXD2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms