Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 AC087499.1-201ENST00000418141 1075 ntBASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 FEM1AP1-201ENST00000431297 1995 ntBASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3RF2Q8TEC5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 PKD1P6-201ENST00000343738 4769 ntBASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 AL353708.3-201ENST00000610272 989 ntBASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 AC133561.5-201ENST00000635547 218 ntBASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3RF2Q8TEC5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
SH3RF2Q8TEC5 AP006587.1-201ENST00000534129 1502 ntBASIC20.52■□□□□ 0.87
SH3RF2Q8TEC5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SH3RF2Q8TEC5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.52■□□□□ 0.87
SH3RF2Q8TEC5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.52■□□□□ 0.87
SH3RF2Q8TEC5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.52■□□□□ 0.87
SH3RF2Q8TEC5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 AC116351.2-201ENST00000606540 1585 ntBASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 AC073314.1-201ENST00000568729 2216 ntBASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.51■□□□□ 0.87
SH3RF2Q8TEC5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.5■□□□□ 0.87
SH3RF2Q8TEC5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 SMG8-203ENST00000578922 2178 ntBASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3RF2Q8TEC5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms