Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 AP002982.1-201ENST00000492365 877 ntBASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHKBP1Q8TBC3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SHKBP1Q8TBC3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SHKBP1Q8TBC3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHKBP1Q8TBC3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.77■□□□□ 0.91
SHKBP1Q8TBC3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SHKBP1Q8TBC3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHKBP1Q8TBC3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 AC006128.1-201ENST00000624704 1661 ntBASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 NUDT16P1-203ENST00000513809 620 ntBASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.74■□□□□ 0.91
SHKBP1Q8TBC3 DPP3P2-201ENST00000416030 1696 ntBASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 MMP23A-201ENST00000234610 1017 ntBASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 AC010331.1-201ENST00000611423 582 ntBASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 REXO1L10P-201ENST00000615707 1290 ntBASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SHKBP1Q8TBC3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHKBP1Q8TBC3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms