Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 AL450487.1-201ENST00000426799 995 ntBASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 AC092647.4-201ENST00000457211 535 ntBASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 AC011506.1-201ENST00000474329 610 ntBASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 AL121956.5-201ENST00000625261 221 ntBASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNIP1Q8TAD8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 TSPY5P-201ENST00000426936 936 ntBASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 YBX1P2-201ENST00000489612 999 ntBASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNIP1Q8TAD8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
SNIP1Q8TAD8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNIP1Q8TAD8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.64■□□□□ 0.58
SNIP1Q8TAD8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SNIP1Q8TAD8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 MIR2861-201ENST00000636310 90 ntBASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNIP1Q8TAD8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 PCED1CP-201ENST00000419887 785 ntBASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 AC004980.1-204ENST00000429707 299 ntBASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 AC116562.4-202ENST00000641738 218 ntBASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
SNIP1Q8TAD8 AIRN-201ENST00000601203 4374 ntBASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 COX11P1-201ENST00000489116 835 ntBASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNIP1Q8TAD8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNIP1Q8TAD8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms