Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC133681.1-201ENST00000465482 601 ntBASIC6.08□□□□□ -1.44
SYNE1Q8NF91 BRWD1-AS2-201ENST00000603064 1028 ntBASIC6.08□□□□□ -1.44
SYNE1Q8NF91 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC092865.7-201ENST00000641832 219 ntBASIC6.08□□□□□ -1.44
SYNE1Q8NF91 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 P4HB-223ENST00000576390 439 ntTSL 4 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC145285.6-201ENST00000604632 637 ntBASIC6.08□□□□□ -1.44
SYNE1Q8NF91 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 KRT8P9-201ENST00000558927 1449 ntBASIC6.08□□□□□ -1.44
SYNE1Q8NF91 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AL024507.2-201ENST00000606070 2574 ntBASIC6.08□□□□□ -1.44
SYNE1Q8NF91 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 AL590326.2-201ENST00000625139 305 ntBASIC6.08□□□□□ -1.44
SYNE1Q8NF91 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNE1Q8NF91 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 AC011484.1-201ENST00000377652 1995 ntBASIC6.07□□□□□ -1.44
SYNE1Q8NF91 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 SAPCD2P4-201ENST00000424595 1171 ntBASIC6.07□□□□□ -1.44
SYNE1Q8NF91 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 DUT-205ENST00000558813 769 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 AC242852.2-201ENST00000615738 1807 ntBASIC6.07□□□□□ -1.44
SYNE1Q8NF91 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SYNE1Q8NF91 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms