Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 HTR7P1-202ENST00000624664 4411 ntBASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC71LQ8N9Z2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 LINC01465-201ENST00000408887 1940 ntBASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC71LQ8N9Z2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 MIR6084-201ENST00000622012 110 ntBASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 KRT16P6-202ENST00000425692 1426 ntBASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 AC093503.3-201ENST00000624917 2352 ntBASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC71LQ8N9Z2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC71LQ8N9Z2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC71LQ8N9Z2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms