Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 MTDHP1-201ENST00000605323 784 ntBASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC26.22■■□□□ 1.79
CCDC146Q8IYE0 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.21■■□□□ 1.79
CCDC146Q8IYE0 ITM2C-210ENST00000620962 501 ntBASIC26.21■■□□□ 1.79
CCDC146Q8IYE0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC146Q8IYE0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC146Q8IYE0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC146Q8IYE0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CCDC146Q8IYE0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC146Q8IYE0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CCDC146Q8IYE0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
CCDC146Q8IYE0 TFP1-202ENST00000475455 1573 ntBASIC26.2■■□□□ 1.79
CCDC146Q8IYE0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC26.2■■□□□ 1.79
CCDC146Q8IYE0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC146Q8IYE0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC146Q8IYE0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC146Q8IYE0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC146Q8IYE0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC146Q8IYE0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC146Q8IYE0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC26.2■■□□□ 1.78
CCDC146Q8IYE0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
CCDC146Q8IYE0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC146Q8IYE0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CCDC146Q8IYE0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 GOLGA2P11-201ENST00000562660 1621 ntBASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 KRT18P29-201ENST00000397031 1267 ntBASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 AL023875.1-201ENST00000640777 796 ntBASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
CCDC146Q8IYE0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC146Q8IYE0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 AC098590.1-201ENST00000468126 897 ntBASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 AL121906.2-201ENST00000621597 723 ntBASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC146Q8IYE0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 AL121829.2-201ENST00000620908 328 ntBASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 AC009237.14-201ENST00000609975 1594 ntBASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
CCDC146Q8IYE0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 RN7SL471P-201ENST00000580476 299 ntBASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 AP001271.2-201ENST00000624018 1556 ntBASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 AL158211.5-201ENST00000623583 2518 ntBASIC26.15■■□□□ 1.78
CCDC146Q8IYE0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC26.14■■□□□ 1.78
CCDC146Q8IYE0 TMEM179-206ENST00000616017 1645 ntBASIC26.14■■□□□ 1.78
CCDC146Q8IYE0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC146Q8IYE0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC146Q8IYE0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.14■■□□□ 1.78
CCDC146Q8IYE0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms