Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 SMG8-203ENST00000578922 2178 ntBASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRIM48Q8IWZ4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.36■□□□□ 0.69
TRIM48Q8IWZ4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 NBPF21P-201ENST00000425093 1451 ntBASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM48Q8IWZ4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM48Q8IWZ4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
TRIM48Q8IWZ4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
TRIM48Q8IWZ4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TRIM48Q8IWZ4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM48Q8IWZ4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms