Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 PTBP1P-201ENST00000554374 1601 ntBASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUDCD3Q8IVD9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 KRT16P6-202ENST00000425692 1426 ntBASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 LINC01465-201ENST00000408887 1940 ntBASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 AC123595.1-201ENST00000440769 1046 ntBASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 AC004854.2-201ENST00000608450 1441 ntBASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUDCD3Q8IVD9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
NUDCD3Q8IVD9 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 AL139246.5-201ENST00000606645 996 ntBASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.58■□□□□ 0.72
NUDCD3Q8IVD9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 CYP21A1P-202ENST00000354927 1481 ntBASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 AP001271.2-201ENST00000624018 1556 ntBASIC19.57■□□□□ 0.72
NUDCD3Q8IVD9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms