Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AL031963.3-201ENST00000606441 850 ntBASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 AL139246.5-201ENST00000606645 996 ntBASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRTM1Q86UE6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 UBE2DNL-204ENST00000602536 740 ntBASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRTM1Q86UE6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 KRT18P14-201ENST00000534205 1250 ntBASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRTM1Q86UE6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 AL591742.1-201ENST00000604433 565 ntBASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 KRT8P20-201ENST00000423953 1409 ntBASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRTM1Q86UE6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRTM1Q86UE6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms