Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 PHGDH-210ENST00000641115 1638 ntBASIC18.18■□□□□ 0.5
ZNF550Q7Z398 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF550Q7Z398 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 AC083880.1-201ENST00000608266 535 ntBASIC18.17■□□□□ 0.5
ZNF550Q7Z398 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 AC125437.2-201ENST00000625180 2167 ntBASIC18.17■□□□□ 0.5
ZNF550Q7Z398 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF550Q7Z398 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 AL390719.1-204ENST00000412397 1219 ntBASIC18.16■□□□□ 0.5
ZNF550Q7Z398 DUSP5P2-201ENST00000426873 1033 ntBASIC18.16■□□□□ 0.5
ZNF550Q7Z398 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.16■□□□□ 0.5
ZNF550Q7Z398 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 AC097658.1-201ENST00000475555 843 ntBASIC18.16■□□□□ 0.5
ZNF550Q7Z398 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF550Q7Z398 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 AC138932.1-201ENST00000534164 6830 ntBASIC18.15■□□□□ 0.5
ZNF550Q7Z398 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 AC091874.3-201ENST00000512672 1195 ntBASIC18.15■□□□□ 0.5
ZNF550Q7Z398 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF550Q7Z398 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
ZNF550Q7Z398 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
ZNF550Q7Z398 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ZNF550Q7Z398 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF550Q7Z398 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms