Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 ABHD17AP1-201ENST00000358206 933 ntBASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 AC128676.1-201ENST00000454392 318 ntBASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 AC233263.1-201ENST00000578059 224 ntBASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 ITM2C-210ENST00000620962 501 ntBASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.46■■□□□ 1.19
PPP4R3AQ6IN85 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
PPP4R3AQ6IN85 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 MTDHP1-201ENST00000605323 784 ntBASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
PPP4R3AQ6IN85 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 TMEM179-206ENST00000616017 1645 ntBASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R3AQ6IN85 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP4R3AQ6IN85 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 RN7SL471P-201ENST00000580476 299 ntBASIC22.42■■□□□ 1.18
PPP4R3AQ6IN85 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms