Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 AC006333.2-201ENST00000607957 2099 ntBASIC18.61■□□□□ 0.57
LPCAT4Q643R3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 AC136469.2-201ENST00000623944 1028 ntBASIC18.61■□□□□ 0.57
LPCAT4Q643R3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.61■□□□□ 0.57
LPCAT4Q643R3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 AC116050.2-201ENST00000612102 1779 ntBASIC18.6■□□□□ 0.57
LPCAT4Q643R3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.6■□□□□ 0.57
LPCAT4Q643R3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 KRT16P3-201ENST00000439127 1283 ntBASIC18.6■□□□□ 0.57
LPCAT4Q643R3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 WIZP1-201ENST00000531444 2299 ntBASIC18.6■□□□□ 0.57
LPCAT4Q643R3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.6■□□□□ 0.57
LPCAT4Q643R3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LPCAT4Q643R3 AL161938.1-201ENST00000569833 2180 ntBASIC18.59■□□□□ 0.57
LPCAT4Q643R3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LPCAT4Q643R3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LPCAT4Q643R3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 AC133561.4-201ENST00000566112 224 ntBASIC18.58■□□□□ 0.56
LPCAT4Q643R3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 AC012313.1-201ENST00000593393 3059 ntBASIC18.58■□□□□ 0.56
LPCAT4Q643R3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.58■□□□□ 0.56
LPCAT4Q643R3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms