Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 AC116562.2-201ENST00000507042 360 ntBASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 AC073195.1-201ENST00000607241 877 ntBASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 PKD1P6-201ENST00000343738 4769 ntBASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ARFGEF3Q5TH69 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 C1QL1P1-201ENST00000568105 661 ntBASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.8■□□□□ 0.28
ARFGEF3Q5TH69 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 KRT16P1-201ENST00000399124 1418 ntBASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 AL391422.3-201ENST00000603791 2761 ntBASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 AC012306.2-201ENST00000609350 630 ntBASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
ARFGEF3Q5TH69 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 HLA-G-202ENST00000376815 851 ntBASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 HLA-G-203ENST00000376818 1127 ntBASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 AC087499.1-201ENST00000418141 1075 ntBASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 KSR1P1-201ENST00000446298 240 ntBASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARFGEF3Q5TH69 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms