Protein–RNA interactions for Protein: Q01081

U2AF1, Splicing factor U2AF 35 kDa subunit, humanhuman

Known RBP eCLIP

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1Q01081 UBAP2L-218ENST00000493867 677 ntTSL 37.05□□□□□ -1.283e-10■■□□□ 11.4
U2AF1Q01081 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.421e-7■■□□□ 11.4
U2AF1Q01081 AFP-205ENST00000513720 197 ntTSL 1 (best)4.8□□□□□ -1.646e-11■■□□□ 11.4
U2AF1Q01081 AFP-207ENST00000515675 317 ntTSL 1 (best)4.61□□□□□ -1.676e-11■■□□□ 11.4
U2AF1Q01081 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC28.24■■■□□ 2.113e-11■□□□□ 11.3
U2AF1Q01081 HGFAC-203ENST00000509689 1894 ntTSL 527.25■■□□□ 1.954e-6■□□□□ 11.3
U2AF1Q01081 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC25.47■■□□□ 1.674e-6■□□□□ 11.3
U2AF1Q01081 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.22■■□□□ 1.633e-11■□□□□ 11.3
U2AF1Q01081 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.354e-6■□□□□ 11.3
U2AF1Q01081 MLLT10-215ENST00000495130 744 ntTSL 316.54■□□□□ 0.243e-11■□□□□ 11.3
U2AF1Q01081 MLLT10-211ENST00000471315 319 ntTSL 315.52■□□□□ 0.083e-11■□□□□ 11.3
U2AF1Q01081 MYB-221ENST00000527615 2381 ntTSL 5 BASIC28.21■■■□□ 2.118e-11■□□□□ 11.3
U2AF1Q01081 MYB-202ENST00000339290 3365 ntTSL 1 (best)22.79■■□□□ 1.248e-11■□□□□ 11.3
U2AF1Q01081 MYB-214ENST00000525477 3431 ntTSL 1 (best)22.22■■□□□ 1.158e-11■□□□□ 11.3
U2AF1Q01081 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.048e-11■□□□□ 11.3
U2AF1Q01081 MYB-237ENST00000533837 3492 ntTSL 1 (best)21.48■■□□□ 1.038e-11■□□□□ 11.3
U2AF1Q01081 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.028e-11■□□□□ 11.3
U2AF1Q01081 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.21■□□□□ 0.838e-11■□□□□ 11.3
U2AF1Q01081 MYB-204ENST00000367812 3565 ntTSL 1 (best)20.21■□□□□ 0.838e-11■□□□□ 11.3
U2AF1Q01081 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.21■□□□□ 0.838e-11■□□□□ 11.3
U2AF1Q01081 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.828e-11■□□□□ 11.3
U2AF1Q01081 MYB-210ENST00000463282 3422 ntTSL 1 (best)20.15■□□□□ 0.828e-11■□□□□ 11.3
U2AF1Q01081 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.1■□□□□ 0.818e-11■□□□□ 11.3
U2AF1Q01081 MYB-232ENST00000531737 2436 ntTSL 1 (best)10.74□□□□□ -0.698e-11■□□□□ 11.3
U2AF1Q01081 MYB-216ENST00000525940 1838 ntTSL 1 (best)10.55□□□□□ -0.728e-11■□□□□ 11.3
U2AF1Q01081 MYB-231ENST00000531634 1824 ntTSL 1 (best)10.55□□□□□ -0.728e-11■□□□□ 11.3
U2AF1Q01081 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC10.55□□□□□ -0.728e-11■□□□□ 11.3
U2AF1Q01081 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC10.55□□□□□ -0.728e-11■□□□□ 11.3
U2AF1Q01081 MYB-225ENST00000528345 1973 ntTSL 1 (best)9.42□□□□□ -0.98e-11■□□□□ 11.3
U2AF1Q01081 MYB-227ENST00000529262 2427 ntTSL 1 (best)9.01□□□□□ -0.978e-11■□□□□ 11.3
U2AF1Q01081 MYB-234ENST00000533384 2521 ntTSL 1 (best)8.98□□□□□ -0.978e-11■□□□□ 11.3
U2AF1Q01081 MYB-218ENST00000526320 3081 ntTSL 1 (best)8.7□□□□□ -1.028e-11■□□□□ 11.3
U2AF1Q01081 MYB-219ENST00000526565 2399 ntTSL 1 (best)8.47□□□□□ -1.058e-11■□□□□ 11.3
U2AF1Q01081 MYB-212ENST00000525002 2182 ntTSL 1 (best)7.78□□□□□ -1.168e-11■□□□□ 11.3
U2AF1Q01081 MYB-217ENST00000526187 2192 ntTSL 1 (best)7.78□□□□□ -1.168e-11■□□□□ 11.3
U2AF1Q01081 MYB-223ENST00000528140 2021 ntTSL 1 (best)7.72□□□□□ -1.178e-11■□□□□ 11.3
U2AF1Q01081 MYB-211ENST00000524588 1630 ntTSL 1 (best)7.53□□□□□ -1.28e-11■□□□□ 11.3
U2AF1Q01081 MYB-224ENST00000528343 2091 ntTSL 1 (best)7.33□□□□□ -1.248e-11■□□□□ 11.3
U2AF1Q01081 MYB-236ENST00000533808 3349 ntTSL 1 (best)7.04□□□□□ -1.288e-11■□□□□ 11.3
U2AF1Q01081 MYB-215ENST00000525514 3288 ntTSL 1 (best)6.8□□□□□ -1.328e-11■□□□□ 11.3
U2AF1Q01081 MYB-233ENST00000531845 3230 ntTSL 26.39□□□□□ -1.398e-11■□□□□ 11.3
U2AF1Q01081 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.27□□□□□ -1.418e-11■□□□□ 11.3
U2AF1Q01081 MYB-208ENST00000438901 3481 ntTSL 1 (best)5.85□□□□□ -1.478e-11■□□□□ 11.3
U2AF1Q01081 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.478e-11■□□□□ 11.3
U2AF1Q01081 MYB-220ENST00000526889 3157 ntTSL 1 (best)5.68□□□□□ -1.58e-11■□□□□ 11.3
U2AF1Q01081 MYB-240ENST00000534736 801 ntTSL 1 (best)5.65□□□□□ -1.58e-11■□□□□ 11.3
U2AF1Q01081 MYB-222ENST00000528015 2201 ntTSL 1 (best)5.42□□□□□ -1.548e-11■□□□□ 11.3
U2AF1Q01081 MYB-229ENST00000529586 3203 ntTSL 1 (best)5.33□□□□□ -1.568e-11■□□□□ 11.3
U2AF1Q01081 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.3□□□□□ -1.568e-11■□□□□ 11.3
U2AF1Q01081 MYB-230ENST00000531519 2911 ntTSL 1 (best)4.31□□□□□ -1.728e-11■□□□□ 11.3
U2AF1Q01081 GAPVD1-220ENST00000497580 3720 ntTSL 216.11■□□□□ 0.172e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC12.48□□□□□ -0.412e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC11.16□□□□□ -0.622e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.812e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC9.75□□□□□ -0.852e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-209ENST00000436712 2490 ntTSL 59.33□□□□□ -0.922e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-212ENST00000467750 3163 ntTSL 59.22□□□□□ -0.932e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-208ENST00000431329 2512 ntTSL 29.11□□□□□ -0.952e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.952e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC9.02□□□□□ -0.972e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -12e-9■□□□□ 11.3
U2AF1Q01081 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC7.07□□□□□ -1.282e-9■□□□□ 11.3
U2AF1Q01081 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.61e-15■□□□□ 11.3
U2AF1Q01081 DDX17-204ENST00000431312 1853 ntTSL 1 (best)17.2■□□□□ 0.341e-15■□□□□ 11.3
U2AF1Q01081 DDX17-201ENST00000216019 6441 ntTSL 1 (best)16.48■□□□□ 0.231e-15■□□□□ 11.3
U2AF1Q01081 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC29.72■■■□□ 2.358e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-212ENST00000492587 780 ntTSL 529.1■■■□□ 2.258e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.068e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-209ENST00000479726 822 ntTSL 521.17■□□□□ 0.988e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-203ENST00000447312 1166 ntTSL 516.97■□□□□ 0.318e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-206ENST00000471105 2093 ntTSL 1 (best)16.41■□□□□ 0.228e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-207ENST00000478617 1069 ntTSL 514.83□□□□□ -0.048e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-213ENST00000492849 958 ntTSL 514.72□□□□□ -0.058e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-210ENST00000481780 847 ntTSL 514.51□□□□□ -0.098e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-211ENST00000487116 851 ntTSL 312.74□□□□□ -0.378e-14■□□□□ 11.3
U2AF1Q01081 RNPEP-204ENST00000449524 505 ntTSL 36.65□□□□□ -1.348e-14■□□□□ 11.3
U2AF1Q01081 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.95■■□□□ 1.261e-7■□□□□ 11.3
U2AF1Q01081 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.963e-6■□□□□ 11.3
U2AF1Q01081 POLG2-208ENST00000582501 925 ntTSL 512.72□□□□□ -0.373e-6■□□□□ 11.3
U2AF1Q01081 POLG2-202ENST00000577506 472 ntTSL 58.83□□□□□ -13e-6■□□□□ 11.3
U2AF1Q01081 POLG2-207ENST00000581355 652 ntTSL 38.83□□□□□ -13e-6■□□□□ 11.3
U2AF1Q01081 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71e-8■□□□□ 11.3
U2AF1Q01081 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.81e-8■□□□□ 11.3
U2AF1Q01081 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.921e-8■□□□□ 11.3
U2AF1Q01081 OGT-208ENST00000472270 689 ntTSL 28.71□□□□□ -1.025e-11■□□□□ 11.3
U2AF1Q01081 HNRNPH1-226ENST00000515446 368 ntTSL 220.54■□□□□ 0.884e-9■□□□□ 11.3
U2AF1Q01081 ST3GAL6-206ENST00000466482 540 ntTSL 430.06■■■□□ 2.42e-6■□□□□ 11.3
U2AF1Q01081 C1GALT1-203ENST00000419721 591 ntTSL 327.92■■■□□ 2.064e-9■□□□□ 11.3
U2AF1Q01081 ST3GAL6-203ENST00000460774 582 ntTSL 325.98■■□□□ 1.752e-6■□□□□ 11.3
U2AF1Q01081 ST3GAL6-227ENST00000497621 2109 ntTSL 1 (best)25.94■■□□□ 1.742e-6■□□□□ 11.3
U2AF1Q01081 ST3GAL6-204ENST00000462152 1102 ntTSL 225.76■■□□□ 1.712e-6■□□□□ 11.3
U2AF1Q01081 ST3GAL6-226ENST00000497008 564 ntTSL 425.72■■□□□ 1.712e-6■□□□□ 11.3
U2AF1Q01081 ST3GAL6-213ENST00000480133 360 ntTSL 424■■□□□ 1.432e-6■□□□□ 11.3
U2AF1Q01081 ST3GAL6-219ENST00000489112 804 ntTSL 323.62■■□□□ 1.372e-6■□□□□ 11.3
U2AF1Q01081 C1GALT1-206ENST00000467716 458 ntTSL 523.35■■□□□ 1.334e-9■□□□□ 11.3
U2AF1Q01081 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.962e-6■□□□□ 11.3
U2AF1Q01081 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)16.93■□□□□ 0.34e-9■□□□□ 11.3
U2AF1Q01081 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.224e-9■□□□□ 11.3
U2AF1Q01081 ST3GAL6-208ENST00000469105 2837 ntTSL 1 (best)16.37■□□□□ 0.212e-6■□□□□ 11.3
U2AF1Q01081 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.192e-6■□□□□ 11.3
Retrieved 100 of 10,096 protein–RNA pairs in 432.1 ms