Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC10.62□□□□□ -0.71
SEC61BP60468 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC10.62□□□□□ -0.71
SEC61BP60468 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC10.62□□□□□ -0.71
SEC61BP60468 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC10.62□□□□□ -0.71
SEC61BP60468 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC10.62□□□□□ -0.71
SEC61BP60468 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC10.62□□□□□ -0.71
SEC61BP60468 TSPY15P-201ENST00000457163 923 ntBASIC10.62□□□□□ -0.71
SEC61BP60468 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC10.62□□□□□ -0.71
SEC61BP60468 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SEC61BP60468 C2orf69P3-201ENST00000565542 1120 ntBASIC10.62□□□□□ -0.71
SEC61BP60468 AC026271.3-201ENST00000571884 352 ntBASIC10.62□□□□□ -0.71
SEC61BP60468 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.62□□□□□ -0.71
SEC61BP60468 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC10.62□□□□□ -0.71
SEC61BP60468 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
SEC61BP60468 REXO1L10P-201ENST00000615707 1290 ntBASIC10.62□□□□□ -0.71
SEC61BP60468 AC092865.7-201ENST00000641832 219 ntBASIC10.62□□□□□ -0.71
SEC61BP60468 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SEC61BP60468 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
SEC61BP60468 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 LINC01568-207ENST00000641790 1380 ntBASIC10.62□□□□□ -0.71
SEC61BP60468 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SEC61BP60468 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
SEC61BP60468 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
SEC61BP60468 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC10.61□□□□□ -0.71
SEC61BP60468 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC10.61□□□□□ -0.71
SEC61BP60468 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC10.61□□□□□ -0.71
SEC61BP60468 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC10.61□□□□□ -0.71
SEC61BP60468 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 TUBB8P6-201ENST00000436895 1288 ntBASIC10.61□□□□□ -0.71
SEC61BP60468 YBX1P10-201ENST00000444752 975 ntBASIC10.61□□□□□ -0.71
SEC61BP60468 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 AC116562.2-201ENST00000507042 360 ntBASIC10.61□□□□□ -0.71
SEC61BP60468 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 AL049597.2-201ENST00000565575 961 ntBASIC10.61□□□□□ -0.71
SEC61BP60468 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC10.61□□□□□ -0.71
SEC61BP60468 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 MIR6786-201ENST00000616843 113 ntBASIC10.61□□□□□ -0.71
SEC61BP60468 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 CLN6-221ENST00000637494 765 ntTSL 5 BASIC10.61□□□□□ -0.71
SEC61BP60468 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SEC61BP60468 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SEC61BP60468 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC10.61□□□□□ -0.71
SEC61BP60468 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SEC61BP60468 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SEC61BP60468 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.6□□□□□ -0.71
SEC61BP60468 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
SEC61BP60468 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SEC61BP60468 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC10.6□□□□□ -0.71
SEC61BP60468 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SEC61BP60468 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SEC61BP60468 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SEC61BP60468 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
SEC61BP60468 PTBP1P-201ENST00000554374 1601 ntBASIC10.6□□□□□ -0.71
SEC61BP60468 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms