Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB38P57729 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB38P57729 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RAB38P57729 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB38P57729 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.6■□□□□ 0.57
RAB38P57729 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB38P57729 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAB38P57729 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB38P57729 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB38P57729 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RAB38P57729 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
RAB38P57729 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RAB38P57729 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB38P57729 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 PRORSD1P-201ENST00000295112 541 ntBASIC18.59■□□□□ 0.57
RAB38P57729 AC239809.2-201ENST00000415381 517 ntBASIC18.59■□□□□ 0.57
RAB38P57729 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB38P57729 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB38P57729 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB38P57729 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB38P57729 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB38P57729 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB38P57729 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB38P57729 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB38P57729 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.59■□□□□ 0.57
RAB38P57729 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB38P57729 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.59■□□□□ 0.57
RAB38P57729 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB38P57729 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB38P57729 AP006587.1-201ENST00000534129 1502 ntBASIC18.59■□□□□ 0.57
RAB38P57729 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB38P57729 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.58■□□□□ 0.57
RAB38P57729 AC073130.3-201ENST00000624389 2278 ntBASIC18.58■□□□□ 0.57
RAB38P57729 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB38P57729 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB38P57729 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB38P57729 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB38P57729 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB38P57729 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB38P57729 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB38P57729 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.58■□□□□ 0.56
RAB38P57729 AL023875.1-201ENST00000640777 796 ntBASIC18.58■□□□□ 0.56
RAB38P57729 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAB38P57729 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAB38P57729 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB38P57729 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB38P57729 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB38P57729 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB38P57729 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB38P57729 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB38P57729 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RAB38P57729 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB38P57729 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB38P57729 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB38P57729 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.57■□□□□ 0.56
RAB38P57729 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB38P57729 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RAB38P57729 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.57■□□□□ 0.56
RAB38P57729 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.57■□□□□ 0.56
RAB38P57729 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RAB38P57729 C1QBPP2-201ENST00000528754 825 ntBASIC18.57■□□□□ 0.56
RAB38P57729 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB38P57729 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB38P57729 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB38P57729 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB38P57729 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAB38P57729 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB38P57729 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms