Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN20P56880 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN20P56880 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 DPP3P2-201ENST00000416030 1696 ntBASIC18.09■□□□□ 0.49
CLDN20P56880 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 PTBP1P-201ENST00000554374 1601 ntBASIC18.09■□□□□ 0.49
CLDN20P56880 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN20P56880 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN20P56880 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN20P56880 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CLDN20P56880 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN20P56880 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 AC005829.2-201ENST00000571422 1056 ntBASIC18.09■□□□□ 0.49
CLDN20P56880 AC006557.6-201ENST00000623071 864 ntBASIC18.09■□□□□ 0.49
CLDN20P56880 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN20P56880 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN20P56880 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN20P56880 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN20P56880 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN20P56880 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN20P56880 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN20P56880 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CLDN20P56880 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN20P56880 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN20P56880 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN20P56880 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.08■□□□□ 0.49
CLDN20P56880 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CLDN20P56880 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN20P56880 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.08■□□□□ 0.48
CLDN20P56880 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLDN20P56880 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.08■□□□□ 0.48
CLDN20P56880 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
CLDN20P56880 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN20P56880 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN20P56880 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN20P56880 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLDN20P56880 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLDN20P56880 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN20P56880 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN20P56880 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN20P56880 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.07■□□□□ 0.48
CLDN20P56880 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CLDN20P56880 AC006058.3-201ENST00000606217 1069 ntBASIC18.07■□□□□ 0.48
CLDN20P56880 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CLDN20P56880 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN20P56880 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN20P56880 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.06■□□□□ 0.48
CLDN20P56880 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLDN20P56880 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 AL390719.1-204ENST00000412397 1219 ntBASIC18.06■□□□□ 0.48
CLDN20P56880 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 AC023632.3-201ENST00000521633 145 ntBASIC18.06■□□□□ 0.48
CLDN20P56880 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.06■□□□□ 0.48
CLDN20P56880 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLDN20P56880 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CLDN20P56880 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLDN20P56880 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.06■□□□□ 0.48
CLDN20P56880 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms