Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN8P56748 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN8P56748 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN8P56748 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN8P56748 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
CLDN8P56748 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN8P56748 AC005181.1-201ENST00000604782 1256 ntBASIC18.78■□□□□ 0.6
CLDN8P56748 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CLDN8P56748 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN8P56748 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 AL032819.2-201ENST00000624543 2162 ntBASIC18.78■□□□□ 0.6
CLDN8P56748 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN8P56748 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLDN8P56748 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN8P56748 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN8P56748 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN8P56748 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLDN8P56748 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 AC133552.2-202ENST00000575694 574 ntBASIC18.77■□□□□ 0.6
CLDN8P56748 MIR5787-201ENST00000611784 55 ntBASIC18.77■□□□□ 0.6
CLDN8P56748 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN8P56748 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN8P56748 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN8P56748 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLDN8P56748 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CLDN8P56748 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN8P56748 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN8P56748 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.77■□□□□ 0.59
CLDN8P56748 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLDN8P56748 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 TNXA-203ENST00000507684 2038 ntBASIC18.76■□□□□ 0.59
CLDN8P56748 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLDN8P56748 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN8P56748 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN8P56748 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLDN8P56748 LSM12P1-201ENST00000411836 588 ntBASIC18.76■□□□□ 0.59
CLDN8P56748 AC004911.1-201ENST00000416316 871 ntBASIC18.76■□□□□ 0.59
CLDN8P56748 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN8P56748 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN8P56748 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN8P56748 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLDN8P56748 AC022517.1-201ENST00000592429 346 ntBASIC18.76■□□□□ 0.59
CLDN8P56748 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN8P56748 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.76■□□□□ 0.59
CLDN8P56748 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN8P56748 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN8P56748 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN8P56748 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLDN8P56748 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLDN8P56748 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN8P56748 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN8P56748 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CLDN8P56748 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN8P56748 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLDN8P56748 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 GPX1P1-201ENST00000388829 606 ntBASIC18.75■□□□□ 0.59
CLDN8P56748 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN8P56748 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN8P56748 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms