Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN6P56747 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN6P56747 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19■□□□□ 0.63
CLDN6P56747 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 AC121338.2-201ENST00000622535 1744 ntBASIC19■□□□□ 0.63
CLDN6P56747 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 FBXW4P1-201ENST00000426721 2239 ntBASIC19■□□□□ 0.63
CLDN6P56747 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19■□□□□ 0.63
CLDN6P56747 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19■□□□□ 0.63
CLDN6P56747 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19■□□□□ 0.63
CLDN6P56747 C2orf69P3-201ENST00000565542 1120 ntBASIC19■□□□□ 0.63
CLDN6P56747 C1QL1P1-201ENST00000568105 661 ntBASIC19■□□□□ 0.63
CLDN6P56747 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19■□□□□ 0.63
CLDN6P56747 FAM87A-204ENST00000613235 858 ntBASIC19■□□□□ 0.63
CLDN6P56747 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLDN6P56747 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLDN6P56747 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN6P56747 KRT8P20-201ENST00000423953 1409 ntBASIC19■□□□□ 0.63
CLDN6P56747 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLDN6P56747 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN6P56747 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CLDN6P56747 FSCN1P1-201ENST00000568912 1481 ntBASIC18.99■□□□□ 0.63
CLDN6P56747 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN6P56747 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN6P56747 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.99■□□□□ 0.63
CLDN6P56747 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 AC097488.1-201ENST00000507834 756 ntBASIC18.99■□□□□ 0.63
CLDN6P56747 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN6P56747 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN6P56747 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CLDN6P56747 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN6P56747 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLDN6P56747 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 AC117947.1-201ENST00000427448 529 ntBASIC18.98■□□□□ 0.63
CLDN6P56747 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN6P56747 AC022616.7-201ENST00000525383 220 ntBASIC18.98■□□□□ 0.63
CLDN6P56747 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN6P56747 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CLDN6P56747 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 AC244015.2-201ENST00000616358 1861 ntBASIC18.97■□□□□ 0.63
CLDN6P56747 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN6P56747 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.97■□□□□ 0.63
CLDN6P56747 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLDN6P56747 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN6P56747 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN6P56747 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN6P56747 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN6P56747 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CLDN6P56747 EGLN1P1-201ENST00000531623 762 ntBASIC18.97■□□□□ 0.63
CLDN6P56747 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.97■□□□□ 0.63
CLDN6P56747 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN6P56747 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CLDN6P56747 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN6P56747 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN6P56747 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLDN6P56747 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms