Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC25.32■■□□□ 1.64
KCNQ4P56696 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC25.32■■□□□ 1.64
KCNQ4P56696 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC25.32■■□□□ 1.64
KCNQ4P56696 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC25.32■■□□□ 1.64
KCNQ4P56696 AL023973.1-201ENST00000624619 620 ntBASIC25.32■■□□□ 1.64
KCNQ4P56696 HLA-A-209ENST00000638375 975 ntBASIC25.32■■□□□ 1.64
KCNQ4P56696 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.32■■□□□ 1.64
KCNQ4P56696 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 AC005332.1-201ENST00000577698 1310 ntBASIC25.32■■□□□ 1.64
KCNQ4P56696 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.31■■□□□ 1.64
KCNQ4P56696 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNQ4P56696 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
KCNQ4P56696 AC005229.4-201ENST00000610085 2198 ntBASIC25.31■■□□□ 1.64
KCNQ4P56696 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNQ4P56696 TUBB8P6-201ENST00000436895 1288 ntBASIC25.31■■□□□ 1.64
KCNQ4P56696 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNQ4P56696 PP7080-204ENST00000510714 601 ntTSL 3 BASIC25.31■■□□□ 1.64
KCNQ4P56696 CD81-212ENST00000526072 1172 ntTSL 5 BASIC25.31■■□□□ 1.64
KCNQ4P56696 AL441883.1-201ENST00000566170 1045 ntBASIC25.31■■□□□ 1.64
KCNQ4P56696 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.31■■□□□ 1.64
KCNQ4P56696 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.31■■□□□ 1.64
KCNQ4P56696 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.31■■□□□ 1.64
KCNQ4P56696 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNQ4P56696 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KCNQ4P56696 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
KCNQ4P56696 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.31■■□□□ 1.64
KCNQ4P56696 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.31■■□□□ 1.64
KCNQ4P56696 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
KCNQ4P56696 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KCNQ4P56696 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.3■■□□□ 1.64
KCNQ4P56696 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.3■■□□□ 1.64
KCNQ4P56696 AC244015.2-201ENST00000616358 1861 ntBASIC25.3■■□□□ 1.64
KCNQ4P56696 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 AC018553.1-201ENST00000616682 1458 ntBASIC25.3■■□□□ 1.64
KCNQ4P56696 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC25.3■■□□□ 1.64
KCNQ4P56696 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC25.3■■□□□ 1.64
KCNQ4P56696 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.3■■□□□ 1.64
KCNQ4P56696 KRT18P38-201ENST00000449496 1282 ntBASIC25.3■■□□□ 1.64
KCNQ4P56696 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.3■■□□□ 1.64
KCNQ4P56696 GPX4-207ENST00000589115 812 ntTSL 2 BASIC25.3■■□□□ 1.64
KCNQ4P56696 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.3■■□□□ 1.64
KCNQ4P56696 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.3■■□□□ 1.64
KCNQ4P56696 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KCNQ4P56696 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
KCNQ4P56696 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNQ4P56696 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.29■■□□□ 1.64
KCNQ4P56696 AC092338.2-201ENST00000568827 1415 ntBASIC25.29■■□□□ 1.64
KCNQ4P56696 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNQ4P56696 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
KCNQ4P56696 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.29■■□□□ 1.64
KCNQ4P56696 AC004951.3-201ENST00000418645 1148 ntBASIC25.29■■□□□ 1.64
KCNQ4P56696 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.29■■□□□ 1.64
KCNQ4P56696 YBX1P10-201ENST00000444752 975 ntBASIC25.29■■□□□ 1.64
KCNQ4P56696 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC25.29■■□□□ 1.64
KCNQ4P56696 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.29■■□□□ 1.64
KCNQ4P56696 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.29■■□□□ 1.64
KCNQ4P56696 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.29■■□□□ 1.64
KCNQ4P56696 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNQ4P56696 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC25.29■■□□□ 1.64
KCNQ4P56696 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
KCNQ4P56696 AC096733.2-201ENST00000609937 1394 ntBASIC25.29■■□□□ 1.64
KCNQ4P56696 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KCNQ4P56696 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KCNQ4P56696 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC25.28■■□□□ 1.64
KCNQ4P56696 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
KCNQ4P56696 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
KCNQ4P56696 CCR12P-201ENST00000446203 998 ntBASIC25.28■■□□□ 1.64
KCNQ4P56696 AL671277.2-201ENST00000458060 996 ntBASIC25.28■■□□□ 1.64
KCNQ4P56696 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.28■■□□□ 1.64
KCNQ4P56696 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
KCNQ4P56696 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.28■■□□□ 1.64
KCNQ4P56696 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
KCNQ4P56696 AL049796.1-201ENST00000565336 1766 ntBASIC25.28■■□□□ 1.64
KCNQ4P56696 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
KCNQ4P56696 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
KCNQ4P56696 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
KCNQ4P56696 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.27■■□□□ 1.64
KCNQ4P56696 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.27■■□□□ 1.64
KCNQ4P56696 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
KCNQ4P56696 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms