Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 AC018553.1-201ENST00000616682 1458 ntBASIC14.72□□□□□ -0.05
CMC4P56277 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.72□□□□□ -0.05
CMC4P56277 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.72□□□□□ -0.05
CMC4P56277 AC073648.6-201ENST00000641589 218 ntBASIC14.72□□□□□ -0.05
CMC4P56277 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.72□□□□□ -0.05
CMC4P56277 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.72□□□□□ -0.05
CMC4P56277 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 AC009237.14-201ENST00000609975 1594 ntBASIC14.72□□□□□ -0.05
CMC4P56277 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CMC4P56277 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CMC4P56277 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.72□□□□□ -0.05
CMC4P56277 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CMC4P56277 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CMC4P56277 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CMC4P56277 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.71□□□□□ -0.05
CMC4P56277 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.71□□□□□ -0.05
CMC4P56277 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 MTDHP1-201ENST00000605323 784 ntBASIC14.71□□□□□ -0.05
CMC4P56277 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
CMC4P56277 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.71□□□□□ -0.05
CMC4P56277 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.71□□□□□ -0.05
CMC4P56277 TFP1-202ENST00000475455 1573 ntBASIC14.71□□□□□ -0.05
CMC4P56277 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.71□□□□□ -0.05
CMC4P56277 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CMC4P56277 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.71□□□□□ -0.05
CMC4P56277 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
CMC4P56277 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CMC4P56277 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.71□□□□□ -0.06
CMC4P56277 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CMC4P56277 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CMC4P56277 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CMC4P56277 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CMC4P56277 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.7□□□□□ -0.06
CMC4P56277 TMEM179-206ENST00000616017 1645 ntBASIC14.7□□□□□ -0.06
CMC4P56277 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CMC4P56277 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.7□□□□□ -0.06
CMC4P56277 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
CMC4P56277 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CMC4P56277 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CMC4P56277 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CMC4P56277 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.7□□□□□ -0.06
CMC4P56277 AC239809.2-201ENST00000415381 517 ntBASIC14.7□□□□□ -0.06
CMC4P56277 YBX1P10-201ENST00000444752 975 ntBASIC14.7□□□□□ -0.06
CMC4P56277 AC133681.1-201ENST00000465482 601 ntBASIC14.7□□□□□ -0.06
CMC4P56277 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.7□□□□□ -0.06
CMC4P56277 MIR4651-201ENST00000582622 73 ntBASIC14.7□□□□□ -0.06
CMC4P56277 AC110285.5-201ENST00000611501 352 ntBASIC14.7□□□□□ -0.06
CMC4P56277 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.7□□□□□ -0.06
CMC4P56277 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CMC4P56277 AL512408.1-201ENST00000569378 2000 ntBASIC14.7□□□□□ -0.06
CMC4P56277 NBPF21P-201ENST00000425093 1451 ntBASIC14.69□□□□□ -0.06
CMC4P56277 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.69□□□□□ -0.06
CMC4P56277 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.69□□□□□ -0.06
CMC4P56277 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.69□□□□□ -0.06
CMC4P56277 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CMC4P56277 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CMC4P56277 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms