Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.92■□□□□ 0.46
SUMO3P55854 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SUMO3P55854 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.92■□□□□ 0.46
SUMO3P55854 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SUMO3P55854 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.92■□□□□ 0.46
SUMO3P55854 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
SUMO3P55854 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SUMO3P55854 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SUMO3P55854 AP006587.1-201ENST00000534129 1502 ntBASIC17.92■□□□□ 0.46
SUMO3P55854 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SUMO3P55854 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SUMO3P55854 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.92■□□□□ 0.46
SUMO3P55854 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SUMO3P55854 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.91■□□□□ 0.46
SUMO3P55854 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.91■□□□□ 0.46
SUMO3P55854 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SUMO3P55854 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.91■□□□□ 0.46
SUMO3P55854 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SUMO3P55854 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SUMO3P55854 POU5F1P3-201ENST00000428824 1078 ntBASIC17.91■□□□□ 0.46
SUMO3P55854 YBX1P10-201ENST00000444752 975 ntBASIC17.91■□□□□ 0.46
SUMO3P55854 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.91■□□□□ 0.46
SUMO3P55854 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SUMO3P55854 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.91■□□□□ 0.46
SUMO3P55854 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.91■□□□□ 0.46
SUMO3P55854 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.91■□□□□ 0.46
SUMO3P55854 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
SUMO3P55854 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.91■□□□□ 0.46
SUMO3P55854 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.91■□□□□ 0.46
SUMO3P55854 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SUMO3P55854 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SUMO3P55854 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SUMO3P55854 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.9■□□□□ 0.46
SUMO3P55854 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.9■□□□□ 0.46
SUMO3P55854 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.9■□□□□ 0.46
SUMO3P55854 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SUMO3P55854 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SUMO3P55854 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SUMO3P55854 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.9■□□□□ 0.46
SUMO3P55854 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SUMO3P55854 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SUMO3P55854 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SUMO3P55854 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.89■□□□□ 0.46
SUMO3P55854 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SUMO3P55854 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SUMO3P55854 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.89■□□□□ 0.45
SUMO3P55854 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.89■□□□□ 0.45
SUMO3P55854 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.89■□□□□ 0.45
SUMO3P55854 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.89■□□□□ 0.45
SUMO3P55854 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.89■□□□□ 0.45
SUMO3P55854 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.89■□□□□ 0.45
SUMO3P55854 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SUMO3P55854 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.89■□□□□ 0.45
SUMO3P55854 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.89■□□□□ 0.45
SUMO3P55854 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SUMO3P55854 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SUMO3P55854 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SUMO3P55854 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SUMO3P55854 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms