Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.59■□□□□ 0.73
CLNS1AP54105 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.59■□□□□ 0.73
CLNS1AP54105 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
CLNS1AP54105 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.59■□□□□ 0.73
CLNS1AP54105 AC012313.1-201ENST00000593393 3059 ntBASIC19.59■□□□□ 0.73
CLNS1AP54105 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CLNS1AP54105 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLNS1AP54105 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CLNS1AP54105 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLNS1AP54105 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.58■□□□□ 0.73
CLNS1AP54105 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLNS1AP54105 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLNS1AP54105 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLNS1AP54105 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLNS1AP54105 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.58■□□□□ 0.73
CLNS1AP54105 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CLNS1AP54105 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.58■□□□□ 0.72
CLNS1AP54105 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.58■□□□□ 0.72
CLNS1AP54105 AL139246.5-201ENST00000606645 996 ntBASIC19.58■□□□□ 0.72
CLNS1AP54105 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.58■□□□□ 0.72
CLNS1AP54105 MIR6084-201ENST00000622012 110 ntBASIC19.58■□□□□ 0.72
CLNS1AP54105 RARRES2P11-201ENST00000635158 484 ntBASIC19.58■□□□□ 0.72
CLNS1AP54105 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
CLNS1AP54105 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.58■□□□□ 0.72
CLNS1AP54105 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLNS1AP54105 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CLNS1AP54105 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLNS1AP54105 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLNS1AP54105 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLNS1AP54105 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLNS1AP54105 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.57■□□□□ 0.72
CLNS1AP54105 AC092720.2-201ENST00000602388 1665 ntBASIC19.57■□□□□ 0.72
CLNS1AP54105 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CLNS1AP54105 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.57■□□□□ 0.72
CLNS1AP54105 AC142381.2-201ENST00000566120 298 ntBASIC19.57■□□□□ 0.72
CLNS1AP54105 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.57■□□□□ 0.72
CLNS1AP54105 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CLNS1AP54105 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLNS1AP54105 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLNS1AP54105 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.57■□□□□ 0.72
CLNS1AP54105 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.57■□□□□ 0.72
CLNS1AP54105 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLNS1AP54105 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.56■□□□□ 0.72
CLNS1AP54105 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CLNS1AP54105 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.56■□□□□ 0.72
CLNS1AP54105 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.56■□□□□ 0.72
CLNS1AP54105 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.56■□□□□ 0.72
CLNS1AP54105 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLNS1AP54105 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLNS1AP54105 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CLNS1AP54105 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.56■□□□□ 0.72
CLNS1AP54105 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms