Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.92■□□□□ 0.78
LIMK2P53671 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.92■□□□□ 0.78
LIMK2P53671 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LIMK2P53671 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.91■□□□□ 0.78
LIMK2P53671 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.91■□□□□ 0.78
LIMK2P53671 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
LIMK2P53671 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
LIMK2P53671 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LIMK2P53671 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
LIMK2P53671 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LIMK2P53671 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.9■□□□□ 0.78
LIMK2P53671 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 UNC93B5-201ENST00000530315 699 ntBASIC19.9■□□□□ 0.78
LIMK2P53671 AL589743.5-201ENST00000616611 1050 ntBASIC19.9■□□□□ 0.78
LIMK2P53671 AC105020.6-201ENST00000621523 1217 ntBASIC19.9■□□□□ 0.78
LIMK2P53671 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LIMK2P53671 KRT8P17-201ENST00000453110 1448 ntBASIC19.9■□□□□ 0.78
LIMK2P53671 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.9■□□□□ 0.78
LIMK2P53671 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.9■□□□□ 0.78
LIMK2P53671 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIMK2P53671 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LIMK2P53671 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
LIMK2P53671 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
LIMK2P53671 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LIMK2P53671 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LIMK2P53671 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
LIMK2P53671 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LIMK2P53671 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.89■□□□□ 0.77
LIMK2P53671 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.89■□□□□ 0.77
LIMK2P53671 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.89■□□□□ 0.77
LIMK2P53671 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.89■□□□□ 0.77
LIMK2P53671 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.89■□□□□ 0.77
LIMK2P53671 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.89■□□□□ 0.77
LIMK2P53671 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LIMK2P53671 AL031963.3-201ENST00000606441 850 ntBASIC19.89■□□□□ 0.77
LIMK2P53671 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.89■□□□□ 0.77
LIMK2P53671 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LIMK2P53671 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LIMK2P53671 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LIMK2P53671 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.88■□□□□ 0.77
LIMK2P53671 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LIMK2P53671 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.88■□□□□ 0.77
LIMK2P53671 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
LIMK2P53671 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LIMK2P53671 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LIMK2P53671 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LIMK2P53671 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.88■□□□□ 0.77
LIMK2P53671 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.88■□□□□ 0.77
LIMK2P53671 AC093827.2-201ENST00000512654 315 ntBASIC19.88■□□□□ 0.77
LIMK2P53671 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.88■□□□□ 0.77
LIMK2P53671 AC006058.3-201ENST00000606217 1069 ntBASIC19.88■□□□□ 0.77
LIMK2P53671 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LIMK2P53671 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.88■□□□□ 0.77
LIMK2P53671 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LIMK2P53671 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LIMK2P53671 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LIMK2P53671 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
LIMK2P53671 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LIMK2P53671 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.87■□□□□ 0.77
LIMK2P53671 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 AC026366.1-201ENST00000488803 879 ntBASIC19.87■□□□□ 0.77
LIMK2P53671 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIMK2P53671 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIMK2P53671 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms