Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC011498.5-201ENST00000592027 486 ntBASIC22.54■■□□□ 1.2
LBX1P52954 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.54■■□□□ 1.2
LBX1P52954 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.54■■□□□ 1.2
LBX1P52954 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.54■■□□□ 1.2
LBX1P52954 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
LBX1P52954 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LBX1P52954 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LBX1P52954 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LBX1P52954 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LBX1P52954 HBZP1-201ENST00000354915 429 ntBASIC22.53■■□□□ 1.2
LBX1P52954 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.53■■□□□ 1.2
LBX1P52954 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.53■■□□□ 1.2
LBX1P52954 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.53■■□□□ 1.2
LBX1P52954 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
LBX1P52954 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
LBX1P52954 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LBX1P52954 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.53■■□□□ 1.2
LBX1P52954 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.53■■□□□ 1.2
LBX1P52954 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LBX1P52954 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LBX1P52954 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LBX1P52954 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LBX1P52954 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LBX1P52954 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.52■■□□□ 1.2
LBX1P52954 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
LBX1P52954 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.52■■□□□ 1.2
LBX1P52954 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LBX1P52954 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.52■■□□□ 1.2
LBX1P52954 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.52■■□□□ 1.2
LBX1P52954 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.52■■□□□ 1.2
LBX1P52954 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.52■■□□□ 1.2
LBX1P52954 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
LBX1P52954 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.52■■□□□ 1.2
LBX1P52954 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LBX1P52954 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.52■■□□□ 1.2
LBX1P52954 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.52■■□□□ 1.2
LBX1P52954 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.52■■□□□ 1.2
LBX1P52954 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.52■■□□□ 1.2
LBX1P52954 AL121912.1-201ENST00000603683 238 ntBASIC22.52■■□□□ 1.2
LBX1P52954 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LBX1P52954 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.52■■□□□ 1.2
LBX1P52954 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
LBX1P52954 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.19
LBX1P52954 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LBX1P52954 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
LBX1P52954 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LBX1P52954 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
LBX1P52954 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LBX1P52954 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LBX1P52954 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
LBX1P52954 TSPY12P-201ENST00000421279 868 ntBASIC22.51■■□□□ 1.19
LBX1P52954 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
LBX1P52954 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LBX1P52954 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.51■■□□□ 1.19
LBX1P52954 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
LBX1P52954 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.51■■□□□ 1.19
LBX1P52954 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
LBX1P52954 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LBX1P52954 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.51■■□□□ 1.19
LBX1P52954 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LBX1P52954 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.5■■□□□ 1.19
LBX1P52954 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LBX1P52954 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.5■■□□□ 1.19
LBX1P52954 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LBX1P52954 TUBB8P6-201ENST00000436895 1288 ntBASIC22.5■■□□□ 1.19
LBX1P52954 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC22.5■■□□□ 1.19
LBX1P52954 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.5■■□□□ 1.19
LBX1P52954 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.5■■□□□ 1.19
LBX1P52954 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LBX1P52954 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LBX1P52954 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LBX1P52954 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.5■■□□□ 1.19
LBX1P52954 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.49■■□□□ 1.19
LBX1P52954 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
LBX1P52954 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LBX1P52954 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.49■■□□□ 1.19
LBX1P52954 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.49■■□□□ 1.19
LBX1P52954 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
LBX1P52954 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.49■■□□□ 1.19
LBX1P52954 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.49■■□□□ 1.19
LBX1P52954 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.49■■□□□ 1.19
LBX1P52954 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.49■■□□□ 1.19
LBX1P52954 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.49■■□□□ 1.19
LBX1P52954 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.49■■□□□ 1.19
LBX1P52954 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.49■■□□□ 1.19
LBX1P52954 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.49■■□□□ 1.19
LBX1P52954 KRT18P31-201ENST00000506277 1292 ntBASIC22.49■■□□□ 1.19
LBX1P52954 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.49■■□□□ 1.19
LBX1P52954 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LBX1P52954 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LBX1P52954 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LBX1P52954 IL9RP2-201ENST00000423948 1312 ntBASIC22.49■■□□□ 1.19
LBX1P52954 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LBX1P52954 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LBX1P52954 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LBX1P52954 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
LBX1P52954 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
LBX1P52954 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LBX1P52954 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.48■■□□□ 1.19
LBX1P52954 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms