Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CX3CR1P49238 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CX3CR1P49238 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CX3CR1P49238 MKRN4P-201ENST00000444706 1521 ntBASIC17.34■□□□□ 0.37
CX3CR1P49238 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.34■□□□□ 0.37
CX3CR1P49238 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.34■□□□□ 0.37
CX3CR1P49238 AC105036.2-201ENST00000569468 176 ntBASIC17.34■□□□□ 0.37
CX3CR1P49238 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CX3CR1P49238 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CX3CR1P49238 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.34■□□□□ 0.37
CX3CR1P49238 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CX3CR1P49238 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CX3CR1P49238 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.33■□□□□ 0.37
CX3CR1P49238 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CX3CR1P49238 BX323043.1-201ENST00000641006 1765 ntBASIC17.33■□□□□ 0.37
CX3CR1P49238 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CX3CR1P49238 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CX3CR1P49238 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CX3CR1P49238 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CX3CR1P49238 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.33■□□□□ 0.37
CX3CR1P49238 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CX3CR1P49238 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CX3CR1P49238 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CX3CR1P49238 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CX3CR1P49238 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.33■□□□□ 0.36
CX3CR1P49238 AC026185.1-201ENST00000445748 174 ntBASIC17.33■□□□□ 0.36
CX3CR1P49238 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.33■□□□□ 0.36
CX3CR1P49238 AF201337.1-201ENST00000520239 748 ntBASIC17.33■□□□□ 0.36
CX3CR1P49238 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.33■□□□□ 0.36
CX3CR1P49238 AC023632.3-201ENST00000521633 145 ntBASIC17.33■□□□□ 0.36
CX3CR1P49238 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.33■□□□□ 0.36
CX3CR1P49238 AL050303.2-201ENST00000619798 666 ntBASIC17.33■□□□□ 0.36
CX3CR1P49238 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.33■□□□□ 0.36
CX3CR1P49238 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CX3CR1P49238 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CX3CR1P49238 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CX3CR1P49238 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CX3CR1P49238 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CX3CR1P49238 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.32■□□□□ 0.36
CX3CR1P49238 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.32■□□□□ 0.36
CX3CR1P49238 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 AP001271.2-201ENST00000624018 1556 ntBASIC17.32■□□□□ 0.36
CX3CR1P49238 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.32■□□□□ 0.36
CX3CR1P49238 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.32■□□□□ 0.36
CX3CR1P49238 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.32■□□□□ 0.36
CX3CR1P49238 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.32■□□□□ 0.36
CX3CR1P49238 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CX3CR1P49238 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 AC116562.4-201ENST00000641316 2276 ntBASIC17.32■□□□□ 0.36
CX3CR1P49238 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CX3CR1P49238 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CX3CR1P49238 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.31■□□□□ 0.36
CX3CR1P49238 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CX3CR1P49238 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.31■□□□□ 0.36
CX3CR1P49238 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.31■□□□□ 0.36
CX3CR1P49238 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.31■□□□□ 0.36
CX3CR1P49238 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CX3CR1P49238 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.31■□□□□ 0.36
CX3CR1P49238 AC018445.3-201ENST00000624177 1945 ntBASIC17.31■□□□□ 0.36
CX3CR1P49238 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CX3CR1P49238 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CX3CR1P49238 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CX3CR1P49238 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.31■□□□□ 0.36
CX3CR1P49238 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.3■□□□□ 0.36
CX3CR1P49238 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 TREX1-205ENST00000625293 1783 ntBASIC17.3■□□□□ 0.36
CX3CR1P49238 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CX3CR1P49238 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms