Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HTTP42858 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
HTTP42858 AL845331.1-201ENST00000424978 1190 ntBASIC22.37■■□□□ 1.17
HTTP42858 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.37■■□□□ 1.17
HTTP42858 AC009078.2-202ENST00000463353 338 ntBASIC22.37■■□□□ 1.17
HTTP42858 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
HTTP42858 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 YBX1P10-201ENST00000444752 975 ntBASIC22.36■■□□□ 1.17
HTTP42858 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
HTTP42858 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
HTTP42858 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.36■■□□□ 1.17
HTTP42858 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HTTP42858 AC116562.4-202ENST00000641738 218 ntBASIC22.36■■□□□ 1.17
HTTP42858 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.36■■□□□ 1.17
HTTP42858 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HTTP42858 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HTTP42858 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.35■■□□□ 1.17
HTTP42858 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
HTTP42858 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.35■■□□□ 1.17
HTTP42858 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.35■■□□□ 1.17
HTTP42858 CALM1-205ENST00000553542 877 ntTSL 5 BASIC22.35■■□□□ 1.17
HTTP42858 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.35■■□□□ 1.17
HTTP42858 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HTTP42858 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HTTP42858 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.35■■□□□ 1.17
HTTP42858 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.35■■□□□ 1.17
HTTP42858 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HTTP42858 AC092119.3-201ENST00000612618 583 ntBASIC22.35■■□□□ 1.17
HTTP42858 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC22.35■■□□□ 1.17
HTTP42858 AC141257.4-201ENST00000634557 245 ntBASIC22.35■■□□□ 1.17
HTTP42858 AC136944.6-201ENST00000634818 245 ntBASIC22.35■■□□□ 1.17
HTTP42858 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HTTP42858 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HTTP42858 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.34■■□□□ 1.17
HTTP42858 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTTP42858 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HTTP42858 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
HTTP42858 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.34■■□□□ 1.17
HTTP42858 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.34■■□□□ 1.17
HTTP42858 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTTP42858 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTTP42858 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
HTTP42858 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
HTTP42858 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
HTTP42858 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTTP42858 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTTP42858 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
HTTP42858 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTTP42858 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.33■■□□□ 1.17
HTTP42858 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.33■■□□□ 1.17
HTTP42858 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.33■■□□□ 1.17
HTTP42858 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.33■■□□□ 1.17
HTTP42858 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTTP42858 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTTP42858 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC22.33■■□□□ 1.17
HTTP42858 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HTTP42858 UNC93B7-201ENST00000509439 705 ntBASIC22.33■■□□□ 1.16
HTTP42858 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.33■■□□□ 1.16
HTTP42858 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.16
HTTP42858 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.33■■□□□ 1.16
HTTP42858 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HTTP42858 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HTTP42858 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.32■■□□□ 1.16
HTTP42858 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.32■■□□□ 1.16
HTTP42858 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.32■■□□□ 1.16
HTTP42858 AC111152.3-201ENST00000569699 673 ntBASIC22.32■■□□□ 1.16
HTTP42858 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.32■■□□□ 1.16
HTTP42858 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.32■■□□□ 1.16
HTTP42858 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.32■■□□□ 1.16
HTTP42858 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HTTP42858 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
HTTP42858 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HTTP42858 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
HTTP42858 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.32■■□□□ 1.16
HTTP42858 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HTTP42858 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HTTP42858 Z85996.1-201ENST00000494644 937 ntBASIC22.31■■□□□ 1.16
HTTP42858 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.31■■□□□ 1.16
HTTP42858 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.31■■□□□ 1.16
HTTP42858 MIR3180-1-201ENST00000580374 94 ntBASIC22.31■■□□□ 1.16
HTTP42858 MIR3180-3-201ENST00000584616 94 ntBASIC22.31■■□□□ 1.16
HTTP42858 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
HTTP42858 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HTTP42858 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.31■■□□□ 1.16
HTTP42858 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.31■■□□□ 1.16
HTTP42858 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HTTP42858 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HTTP42858 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HTTP42858 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
HTTP42858 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
HTTP42858 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms